| added |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/das/Capabilities16.java |
08/11/2009 18:27:45 |
using enums for 1.6 |
| modified |
jwarren |
/dasobert/trunk/test/tests/org/biojava/dasobert/dasregistry/Das1ValidatorTest.java |
08/11/2009 17:06:10 |
validation tests added |
| added |
jwarren |
/dasobert/trunk/test/tests/org/biojava/dasobert/dasregistry/Das1_6ValidatorTest.java |
08/11/2009 17:06:10 |
validation tests added |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/Das1Validator.java |
08/11/2009 17:05:48 |
Das16Validator extends Das1Validator to remove duplicate code |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/Das1_6Validator.java |
08/11/2009 17:05:48 |
Das16Validator extends Das1Validator to remove duplicate code |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/DasSourceComparator.java |
08/11/2009 12:03:06 |
made capabilities sorter work on the number of valid capabilities |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/Das1Validator.java |
08/05/2009 15:42:49 |
ontologies use all ontologies available from OLS |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/SimpleTerm.java |
08/05/2009 15:42:49 |
ontologies use all ontologies available from OLS |
| modified |
jwarren |
/dasobert/trunk/src/log4j.properties |
08/05/2009 15:42:49 |
ontologies use all ontologies available from OLS |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/das/validation/DasRegistryOntologyLookUp.java |
08/05/2009 15:42:49 |
ontologies use all ontologies available from OLS |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/das/validation/DasRegistryOntologyLookUp.java |
08/04/2009 18:57:34 |
|
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/Das1Validator.java |
07/31/2009 17:17:14 |
|
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/Das1_6Validator.java |
07/31/2009 17:17:14 |
|
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/DasCoordinateSystem.java |
07/31/2009 17:17:14 |
|
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/Das1Source.java |
07/31/2009 17:17:14 |
|
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/das2/DasSourceConverter.java |
07/31/2009 17:16:43 |
fixed sources bug which causes wrong url to be set in DAS1Sources because of DAs2SourceHandler converter. |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/das2/io/Das1RegistryCoordinatesHandler.java |
07/31/2009 17:16:16 |
|
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/das2/io/Das2SourceHandler.java |
07/31/2009 17:15:49 |
fixed sources bug which causes wrong url to be set in DAS1Sources because of DAs2SourceHandler converter. |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/DasCoordinateSystem.java |
07/29/2009 19:00:46 |
put case sensitivity back into coordinate system, but kept trim() |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/SimpleTerm.java |
07/29/2009 18:36:58 |
|
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/Das1_6Validator.java |
07/29/2009 18:36:30 |
|
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/Das1Validator.java |
07/29/2009 18:34:40 |
change biosapiens ontology message to any of so ,eco, bs ontologies |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/DasCoordinateSystem.java |
07/29/2009 18:29:56 |
changed dascoordinatesystem to be case insensitive and trim() all variables in the set methods |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/das2/io/Das1RegistryCoordinatesHandler.java |
07/29/2009 18:21:23 |
|
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/Das1Source.java |
07/28/2009 11:57:29 |
removed String[] from default constructor |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/das/validation/RegReportErrorHandler.java |
07/28/2009 11:40:08 |
removed getsystem id from output of relaxng error messages as made them cluttered |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/das/Capabilities.java |
07/28/2009 11:39:00 |
changed order of capabilities for traffic light display purposes |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/Das1_6Validator.java |
07/27/2009 17:46:42 |
changed ontology validation to only come back with error messages if there are errors! |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/Das1Validator.java |
07/27/2009 17:30:02 |
changed ontology validation to only come back with error messages if there are errors! |
| modified |
aj |
/dasobert/trunk/build.xml |
07/07/2009 17:20:56 |
Added log4j to list of dependencies in classpath |
| added |
aj |
/dasobert/trunk/jars/log4j-1.2.15.jar |
07/07/2009 17:17:46 |
Added log4j jar |
| modified |
aj |
/dasobert/trunk/src/org/biojava/dasobert/das2/io/DASRegistryCoordinatesReader.java |
07/07/2009 16:59:26 |
Added missing method to interface |
| modified |
aj |
/dasobert/trunk/src/org/biojava/dasobert/das2/io/DASRegistryCoordinatesReaderXML.java |
07/07/2009 16:59:01 |
Cleaned up imports. |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/Das1Validator.java |
07/03/2009 15:54:07 |
got rid of "number of invalid sources" message that is confusing to users |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/Das1_6Validator.java |
07/03/2009 15:54:07 |
got rid of "number of invalid sources" message that is confusing to users |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/Das1Validator.java |
07/01/2009 18:52:16 |
added support for fine grained validation of capabilities for registry version 2.3.01 |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/das/Capabilities.java |
07/01/2009 18:52:16 |
added support for fine grained validation of capabilities for registry version 2.3.01 |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/das2/io/DasSourceWriterImpl.java |
07/01/2009 18:52:16 |
added support for fine grained validation of capabilities for registry version 2.3.01 |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/Das1Source.java |
07/01/2009 18:52:16 |
added support for fine grained validation of capabilities for registry version 2.3.01 |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/das/validation/RegistryRelaxNG.java |
07/01/2009 18:52:16 |
added support for fine grained validation of capabilities for registry version 2.3.01 |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/das/validation/RelaxNGValidatorMSV.java |
07/01/2009 18:52:16 |
added support for fine grained validation of capabilities for registry version 2.3.01 |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/DasSource.java |
06/23/2009 17:35:45 |
with validated capabilities in DasSources |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/Das1Source.java |
06/23/2009 17:35:45 |
with validated capabilities in DasSources |
| added |
jwarren |
/dasobert/trunk/test/tests |
06/22/2009 17:44:44 |
commit before branch for fine grained validation |
| added |
jwarren |
/dasobert/trunk/test/tests/org/biojava |
06/22/2009 17:44:44 |
commit before branch for fine grained validation |
| added |
jwarren |
/dasobert/trunk/test/tests/org/biojava/dasobert/dasregistry/Das1ValidatorTest.java |
06/22/2009 17:44:44 |
commit before branch for fine grained validation |
| added |
jwarren |
/dasobert/trunk/test/tests/org/biojava/dasobert |
06/22/2009 17:44:44 |
commit before branch for fine grained validation |
| added |
jwarren |
/dasobert/trunk/test/tests/org/biojava/dasobert/dasregistry |
06/22/2009 17:44:44 |
commit before branch for fine grained validation |
| added |
jwarren |
/dasobert/trunk/test/tests/org |
06/22/2009 17:44:44 |
commit before branch for fine grained validation |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/Das1Validator.java |
06/22/2009 17:44:22 |
commit before branch for fine grained validation |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/das2/io/DASRegistryCoordinatesReaderXML.java |
06/22/2009 17:44:22 |
commit before branch for fine grained validation |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/das2/io/DasSourceIndexWriterImpl.java |
06/22/2009 17:44:22 |
commit before branch for fine grained validation |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/das/Capabilities.java |
06/22/2009 17:44:22 |
commit before branch for fine grained validation |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/dasregistry/DasCoordinateSystem.java |
06/22/2009 17:44:22 |
commit before branch for fine grained validation |
| added |
jwarren |
/dasobert/trunk/src/log4j.properties |
06/22/2009 17:44:22 |
commit before branch for fine grained validation |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/das/validation/DasRegistryOntologyLookUp.java |
06/22/2009 17:44:22 |
commit before branch for fine grained validation |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/das2/io/Das2SourceHandler.java |
06/22/2009 17:44:22 |
commit before branch for fine grained validation |
| modified |
jwarren |
/dasobert/trunk/src/org/biojava/dasobert/das2/io/Das1RegistryCoordinatesHandler.java |
06/22/2009 17:44:22 |
commit before branch for fine grained validation |