API Specification Errors
Errors in Class: org.biojava.bio.program.gff.SimpleGFFRecord


Category 2: Member Error

SimpleGFFRecord(String, String, String, int, int, double, StrandedFeature.Strand, int, String, Map)
  • Constructor missing comment. 
/**
 * Constructs a SimpleGFFRecord object.
 *
 * @param seqName          a String ...
 * @param source           a String ...
 * @param feature          a String ...
 * @param start            an int specifying ...
 * @param end              an int specifying ...
 * @param score            a double
 * @param strand           a Strand object
 * @param frame            an int specifying ...
 * @param comment          a String ...
 * @param groupAttributes  a Map object
 */
getGroupAttributes()
  • Method missing comment, but reasonably self-evident. 
/**
 * Returns the group attributes value.
 */

Category 4: Text/Link Error

SimpleGFFRecord(GFFRecord)
  • Html Error in First Sentence
    --Missing a period 
Create a new SimpleGFFRecord from GFFRecord object













SimpleGFFRecord()







    

  • Html Error in First Sentence


    
--Missing a period




Create a new SimpleGFFRecord with values set to null or zero













setSeqName(String)







    

  • Missing @see tag.




 *
 * @see #getSeqName














setSource(String)







    

  • Missing @see tag.

  • Html Error in First Sentence


    


    • Unclosed HTML: <span>
    • Extra HTML: </source>



<span class="arg">source</source>.
</source>.
 *
 * @see #getSource














setFeature(String)







    

  • Missing @see tag.

  • Html Error in First Sentence


    


    • Unclosed HTML: <span>
    • Extra HTML: </source>



<span class="arg">type</source>.
</source>.
 *
 * @see #getFeature














setStart(int)







    

  • Missing @see tag.

  • Html Error in First Sentence


    


    • Unclosed HTML: <span>
    • Extra HTML: </source>



<span class="arg">start</source>.
</source>.
 *
 * @see #getStart














setEnd(int)







    

  • Missing @see tag.

  • Html Error in First Sentence


    


    • Unclosed HTML: <span>
    • Extra HTML: </source>



<span class="arg">end</source>.
</source>.
 *
 * @see #getEnd














setScore(double)







    

  • Missing @see tag.

  • Html Error in First Sentence


    


    • Unclosed HTML: <span>
    • Extra HTML: </source>



<span class="arg">score</source>.
</source>.
 *
 * @see #getScore














setStrand(StrandedFeature.Strand)







    

  • Missing @see tag.

  • Html Error in First Sentence


    


    • Unclosed HTML: <span>
    • Extra HTML: </source>



<span class="arg">strand</source>.
</source>.
 *
 * @see #getStrand














setFrame(int)







    

  • Missing @see tag.

  • Html Error in First Sentence


    


    • Unclosed HTML: <span>
    • Extra HTML: </source>



<span class="arg">frame</source>.
</source>.
 *
 * @see #getFrame














setGroupAttributes(Map)







    

  • Missing @see tag.




 *
 * @see #getGroupAttributes














setComment(String)







    

  • Missing @see tag.

  • Html Error in First Sentence


    


    • Unclosed HTML: <span>
    • Extra HTML: </source>



<span class="arg">comment</source>.
</source>.
 *
 * @see #getComment













Explanation of Columns





Left Column

Identifies the error or warning.

Right Column

Shows the comment-text that generated the error in red.



Displays a template you can cut and paste in black.